aptaselect
AptaSelect identifies high-frequency aptamer candidate sequences from paired-end FASTQ files produced by SELEX experiments. The pipeline joins paired-end reads, applies three sequential pattern-based filtering stages (Selection, 1st Sort, 2nd Sort), and aggregates and ranks sequences by frequency at each stage.
VERSION 1.0.0
AUTHOR khyeonm
INPUT Read 1 FASTQRead 2 FASTQ
OUTPUT Frequency-ranked sequence lists (TSV)Pipeline summary statistics
FILES
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